By 1640, the town's theocratic government and nine-square grid plan were in place, and the town was renamed Newhaven from Quinnipiac. However, the area north of New Haven remained Quinnipiac until 1678, when it was renamed Hamden. The settlement became the headquarters of the New Haven Colony. At the time, the New Haven Colony was separate from the Connecticut Colony, which had been established to the north centering on Hartford. One of the principal differences between the two colonies was that the New Haven colony was an intolerant theocracy that did not permit other churches to be established, while the Connecticut colony permitted the establishment of other churches.

What type of government did the Puritan settlers establish?